Sequence Similarity Clusters for the Entities in PDB 3EDL

Entity #1 | Chains: A
Alpha-tubulin protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 29 1532
95 % 239 248 12
90 % 240 249 15
70 % 254 263 21
50 % 254 263 43
40 % 508 526 8
30 % 516 534 11
Entity #2 | Chains: B,G
Beta tubulin protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 57 109
95 % 237 245 13
90 % 247 255 13
70 % 255 263 20
50 % 255 263 41
40 % 509 526 8
30 % 517 534 11
Entity #3 | Chains: D
Kinesin13 Motor domain protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73818
95 % 1 1 52782
90 % 1 1 49975
70 % 1 1 43700
50 % 1 1 37769
40 % 2 2 25056
30 % 149 154 231
Entity #4 | Chains: F
Alpha-tubulin protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 18728
95 % 240 248 12
90 % 241 249 15
70 % 255 263 21
50 % 255 263 43
40 % 510 526 8
30 % 518 534 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures