Sequence Similarity Clusters for the Entities in PDB 3ED1

Entity #1 | Chains: A,B,C,D,E,F
Gibberellin receptor GID1 protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 6345
95 % 1 2 7026 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 1 2 7049
70 % 1 2 7119
50 % 3 4 5288
40 % 3 4 5141
30 % 3 4 4908

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures