Sequence Similarity Clusters for the Entities in PDB 3E9M

Entity #1 | Chains: A,B,C,D
Oxidoreductase, Gfo/Idh/MocA family protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25670
95 % 1 1 22495 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 1 1 21822
70 % 1 1 18222
50 % 1 1 16283
40 % 2 2 13432
30 % 2 2 12226

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures