Sequence Similarity Clusters for the Entities in PDB 3DSU

Entity #1 | Chains: A
Geranylgeranyl transferase type-2 subunit alpha protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 3274
95 % 3 19 3980 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 3 19 4030
70 % 3 19 4023
50 % 3 19 3922
40 % 3 19 3862
30 % 3 19 3787
Entity #2 | Chains: B
Geranylgeranyl transferase type-2 subunit beta protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 21 2760
95 % 3 22 3241 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 3 22 3313
70 % 3 22 3329
50 % 3 22 3281
40 % 3 22 3268
30 % 3 22 3202

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures