Sequence Similarity Clusters for the Entities in PDB 3DQ4

Entity #1 | Chains: A
Green fluorescent protein protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 26 2215
95 % 115 288 70 Flexibility: Low
Max RMSD: 22.5, Avg RMSD: 1.0
PDBFlex
90 % 119 334 36
70 % 119 340 41
50 % 119 341 76
40 % 119 342 89
30 % 119 342 91

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures