Sequence Similarity Clusters for the Entities in PDB 3DM9

Entity #1 | Chains: B
Signal recognition particle receptor protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 17397
95 % 3 3 16331 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 3 3 16077
70 % 3 3 15070
50 % 3 3 13600
40 % 3 3 12635
30 % 39 59 662

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures