Sequence Similarity Clusters for the Entities in PDB 3DKQ

Entity #1 | Chains: A,B,C
PKHD-type hydroxylase Sbal_3634 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28797
95 % 1 1 24482 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 1 23725
70 % 1 1 24988
50 % 1 1 21024
40 % 1 1 20086
30 % 1 1 17993

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures