Sequence Similarity Clusters for the Entities in PDB 3DAC

Entity #1 | Chains: A,M
Mdm4 protein protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40124
95 % 1 3 11511 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 3 11383
70 % 1 3 10878
50 % 1 3 9985
40 % 1 3 9440
30 % 1 3 8725
Entity #2 | Chains: B,P
Cellular tumor antigen p53 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46605
95 % 1 1 35958
90 % 1 1 36668
70 % 1 1 32704
50 % 1 1 24285
40 % 1 1 25802
30 % 1 1 21672

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3DAC 2 B, P Cellular tumor antigen p53 UNP residues 17-37 9606