Sequence Similarity Clusters for the Entities in PDB 3DAC

Entity #1 | Chains: A,M
Mdm4 protein protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49988
95 % 1 3 11423 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 3 11296
70 % 1 3 10804
50 % 1 3 9899
40 % 1 3 9349
30 % 1 3 8648
Entity #2 | Chains: B,P
Cellular tumor antigen p53 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40478
95 % 1 1 36390
90 % 1 1 34119
70 % 1 1 32461
50 % 1 1 26667
40 % 1 1 25586
30 % 1 1 22698

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures