Sequence Similarity Clusters for the Entities in PDB 3D9U

Entity #1 | Chains: A
Baculoviral IAP repeat-containing protein 2 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 23501
95 % 3 3 19495 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.9
PDBFlex
90 % 3 4 16954
70 % 5 5 11389
50 % 5 5 10447
40 % 12 28 1114
30 % 12 28 1156
Entity #2 | Chains: B
SMAC/DIABLO protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures