Sequence Similarity Clusters for the Entities in PDB 3D9C

Entity #1 | Chains: A
Tyrosine-protein phosphatase non-receptor type 1 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 76 94 386
95 % 239 271 139 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.8
PDBFlex
90 % 239 271 147
70 % 240 273 165
50 % 240 274 187
40 % 240 274 200
30 % 240 274 212

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures