Sequence Similarity Clusters for the Entities in PDB 3D0I

Entity #1 | Chains: A,B
Angiotensin-converting enzyme 2 protein, length: 597 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15213
95 % 4 15 2578 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.5
PDBFlex
90 % 4 15 2646
70 % 4 15 2698
50 % 4 15 2698
40 % 69 82 495
30 % 69 82 517
Entity #2 | Chains: E,F
Spike glycoprotein protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51597
95 % 6 11 3370 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.3
PDBFlex
90 % 6 11 3431
70 % 6 11 3427
50 % 6 11 3372
40 % 6 11 3369
30 % 6 11 3294

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures