Sequence Similarity Clusters for the Entities in PDB 3CJS

Entity #1 | Chains: A
Ribosomal protein L11 methyltransferase protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 79992
95 % 1 1 47327
90 % 1 1 45989
70 % 1 1 40471
50 % 1 1 34994
40 % 1 1 30932
30 % 1 1 27916
Entity #2 | Chains: B,C
50S ribosomal protein L11 protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43098
95 % 1 1 33799 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 32378
70 % 1 2 24170
50 % 1 2 21443
40 % 1 2 19422
30 % 1 2 17409

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures