Sequence Similarity Clusters for the Entities in PDB 3C6U

Entity #1 | Chains: A
Reverse transcriptase protein, length: 563 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 62 642
95 % 107 291 109 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.7
PDBFlex
90 % 107 291 116
70 % 107 291 126
50 % 108 292 149
40 % 108 293 163
30 % 108 293 166
Entity #2 | Chains: B
Reverse transcriptase protein, length: 443 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 58 807
95 % 104 285 114 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 104 285 122
70 % 104 285 129
50 % 105 286 154
40 % 105 287 169
30 % 105 287 173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures