Sequence Similarity Clusters for the Entities in PDB 3BZF

Entity #1 | Chains: A,C
HLA class I histocompatibility antigen, alpha chain E protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2648
95 % 3 16 1543 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 3 16 1559
70 % 565 817 5
50 % 572 831 8
40 % 609 876 9
30 % 614 900 12
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 503 710 2
95 % 1 1 35905 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 1 1 36448
70 % 564 807 6
50 % 733 1104 4
40 % 733 1104 5
30 % 733 1104 9
Entity #3 | Chains: P,Q
leader peptide of HLA class I histocompatibility antigen, Cw-7 alpha chain protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3BZF 1 A, C HLA class I histocompatibility antigen, alpha chain E residues 1-276 9606
2 2ESV 1 A HLA class I histocompatibility antigen, alpha chain E Extracellular domain 9606
3 3AM8 1 A, B HLA class I histocompatibility antigen, alpha chain E resideus in UNP 22-297 9606
4 3BZE 1 A, C, E, G HLA class I histocompatibility antigen, alpha chain E residues 2-274 9606
5 1MHE 1 A, C HLA CLASS I HISTOCOMPATIBILITY ANTIGEN HLA-E EXTRACELLULAR DOMAIN, ALPHA CHAIN E 9606
6 5W1W 1 A, F, K, P HLA class I histocompatibility antigen, alpha chain E 9606
7 5W1V 1 A, F, K, P HLA class I histocompatibility antigen, alpha chain E 9606
8 3CDG 1 A, C HLA class I histocompatibility antigen, alpha chain E residues in database 23-295 9606
9 3CII 1 A, D HLA class I histocompatibility antigen, alpha chain E Ectodomain 9606