Sequence Similarity Clusters for the Entities in PDB 3BZF

Entity #1 | Chains: A,C
HLA class I histocompatibility antigen, alpha chain E protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2643
95 % 3 16 1525 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 3 16 1546
70 % 569 822 6
50 % 570 827 8
40 % 607 871 9
30 % 612 895 12
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 502 708 2
95 % 535 757 2 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 1 1 34054
70 % 717 1076 4
50 % 731 1100 4
40 % 731 1100 4
30 % 731 1100 7
Entity #3 | Chains: P,Q
leader peptide of HLA class I histocompatibility antigen, Cw-7 alpha chain protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures