Sequence Similarity Clusters for the Entities in PDB 3BRV

Entity #1 | Chains: A,C
Inhibitor of nuclear factor kappa-B kinase subunit beta protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49644
95 % 1 1 37088 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 35403
70 % 1 2 18994
50 % 1 2 16501
40 % 1 2 14713
30 % 1 2 12604
Entity #2 | Chains: B,D
NF-kappa-B essential modulator protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49017
95 % 1 2 21111 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 1 2 20516
70 % 1 2 18842
50 % 1 2 16364
40 % 1 2 14593
30 % 1 2 12489

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures