Sequence Similarity Clusters for the Entities in PDB 3BRV

Entity #1 | Chains: A,C
Inhibitor of nuclear factor kappa-B kinase subunit beta protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37999
95 % 1 1 32223 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 30859
70 % 1 2 14656
50 % 1 2 12918
40 % 1 2 11593
30 % 1 2 9836
Entity #2 | Chains: B,D
NF-kappa-B essential modulator protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31287
95 % 1 2 16014 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 1 2 15681
70 % 1 2 14655
50 % 1 2 12917
40 % 1 2 11592
30 % 1 2 9835

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures