Sequence Similarity Clusters for the Entities in PDB 3BRV

Entity #1 | Chains: A,C
Inhibitor of nuclear factor kappa-B kinase subunit beta protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48945
95 % 1 1 36576 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 34933
70 % 1 2 18711
50 % 1 2 16267
40 % 1 2 14513
30 % 1 2 12430
Entity #2 | Chains: B,D
NF-kappa-B essential modulator protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48322
95 % 1 2 20800 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 1 2 20230
70 % 1 2 18559
50 % 1 2 16131
40 % 1 2 14394
30 % 1 2 12316

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.