Sequence Similarity Clusters for the Entities in PDB 3BQD

Entity #1 | Chains: A
Glucocorticoid receptor protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 84475
95 % 17 25 1440 Flexibility: Medium
Max RMSD: 16.7, Avg RMSD: 4.9
PDBFlex
90 % 20 28 1377
70 % 20 28 1417
50 % 49 59 631
40 % 49 59 661
30 % 49 59 694
Entity #2 | Chains: B
Nuclear receptor coactivator 1 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures