Sequence Similarity Clusters for the Entities in PDB 3AXK

Entity #1 | Chains: A,B
Ribulose bisphosphate carboxylase large chain protein, length: 477 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 5937
95 % 4 4 4994 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 7 22 695
70 % 12 45 144
50 % 16 57 136
40 % 16 57 154
30 % 16 57 158
Entity #2 | Chains: S,T
Ribulose bisphosphate carboxylase small chain, chloroplastic protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41796
95 % 3 3 6857 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 3 3 7087
70 % 5 20 796
50 % 5 21 746
40 % 9 32 372
30 % 9 32 384

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures