Sequence Similarity Clusters for the Entities in PDB 3AUW

Entity #1 | Chains: A,C
Potassium inwardly-rectifying channel, subfamily J, member 6 protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50050
95 % 1 1 38087
90 % 1 1 28410
70 % 1 1 35269
50 % 1 1 28334
40 % 1 1 20661
30 % 1 1 22740
Entity #2 | Chains: B,D
Potassium inwardly-rectifying channel, subfamily J, member 6 protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35861
95 % 1 1 29496 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 36432
70 % 1 1 32470
50 % 1 1 28269
40 % 1 1 25645
30 % 1 1 22739

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures