Sequence Similarity Clusters for the Entities in PDB 3APZ

Entity #1 | Chains: A,B
Geranyl diphosphate synthase protein, length: 348 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51559
95 % 1 2 7977 Flexibility: Medium
Max RMSD: 14.1, Avg RMSD: 7.9
PDBFlex
90 % 1 2 7946
70 % 1 2 7782
50 % 1 2 7325
40 % 1 2 7063
30 % 1 2 6606

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures