Sequence Similarity Clusters for the Entities in PDB 3AEM

Entity #1 | Chains: A,B,D
Methionine gamma-lyase protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 2021
95 % 6 10 2606 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 6 10 2669
70 % 6 10 2697
50 % 6 10 2700
40 % 36 63 374
30 % 48 78 230
Entity #2 | Chains: C
Methionine gamma-lyase protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 2021
95 % 7 10 2606 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 7 10 2669
70 % 7 10 2697
50 % 7 10 2700
40 % 37 63 374
30 % 49 78 230

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures