3A6B

Crystal Structure of HyHEL-10 Fv mutant LN32D complexed with hen egg white lysozyme


Sequence Similarity Clusters for the Entities in PDB 3A6B

Entity #1 | Chains: L
Lysozyme binding ig kappa chain V23-J2 region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 19025
95 % 10 22 2978
90 % 10 24 2769
70 % 10 29 2160
50 % 71 413 20
40 % 79 438 23
30 % 245 1353 5
Entity #2 | Chains: H
IG VH, anti-lysozyme protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 11 5137
95 % 10 22 2979
90 % 10 22 3056
70 % 10 42 1181
50 % 173 901 4
40 % 173 918 5
30 % 246 1353 5
Entity #3 | Chains: Y
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 476 787 3
95 % 516 843 5
90 % 523 860 6
70 % 528 867 11
50 % 700 1095 8
40 % 706 1130 9
30 % 706 1132 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures