Sequence Similarity Clusters for the Entities in PDB 2Z5K

Entity #1 | Chains: A
Transportin-1 protein, length: 890 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 7839
95 % 3 18 2934 Flexibility: Medium
Max RMSD: 8.3, Avg RMSD: 3.8
PDBFlex
90 % 3 18 3010
70 % 3 18 3053
50 % 3 18 3051
40 % 3 18 3055
30 % 3 18 3016
Entity #2 | Chains: B
Nuclear RNA export factor 1 protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 53496
95 % 1 2 37143
90 % 1 2 35506
70 % 1 2 31633
50 % 1 2 27575
40 % 1 2 25162
30 % 1 2 22368

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures