Sequence Similarity Clusters for the Entities in PDB 2YY5

Entity #1 | Chains: A,B,C,D
Tryptophanyl-tRNA synthetase protein, length: 348 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21174
95 % 1 1 19866 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 1 19402
70 % 1 1 18006
50 % 1 1 16127
40 % 15 21 1070
30 % 23 31 813

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3SZ3 1 A Tryptophanyl-tRNA synthetase 666 6.1.1.2 | Details
2 6NCR 1 A, B Tryptophan--tRNA ligase 813 6.1.1.2 | Details
3 5EKD 1 A, B Tryptophan--tRNA ligase, mitochondrial 9606 6.1.1.2 | Details
4 1I6L 1 A TRYPTOPHANYL-TRNA SYNTHETASE 1422 6.1.1.2 | Details
5 1I6M 1 A TRYPTOPHANYL-TRNA SYNTHETASE 1422 6.1.1.2 | Details
6 5DK4 1 A Tryptophan--tRNA ligase 1422 6.1.1.2 | Details
7 1I6K 1 A TRYPTOPHANYL-TRNA SYNTHETASE 1422 6.1.1.2 | Details
8 3N9I 1 A, B Tryptophanyl-tRNA synthetase 632 6.1.1.2 | Details
9 5V0I 1 A, B Tryptophan--tRNA ligase 562 6.1.1.2 | Details
10 6DFU 1 A, B Tryptophan--tRNA ligase 727 6.1.1.2 | Details
11 6MTK 1 A Tryptophanyl-tRNA synthetase 1117645 6.1.1.2 | Details
12 3TZL 1 A, B Tryptophanyl-tRNA synthetase 197 6.1.1.2 | Details
13 5TEV 1 A, B Tryptophan--tRNA ligase 485 6.1.1.2 | Details
14 1MAU 1 A tryptophan-tRNA ligase 1422 6.1.1.2 | Details
15 3M5W 1 A, B Tryptophanyl-tRNA synthetase 197 6.1.1.2 | Details
16 1M83 1 A Tryptophan-tRNA ligase 1422 6.1.1.2 | Details
17 1YI8 1 A, B, C tryptophanyl-tRNA synthetase Enzyme 1299 6.1.1.2 | Details
18 5TEW 1 A Tryptophan--tRNA ligase 485 6.1.1.2 | Details
19 2OV4 1 A Tryptophanyl-tRNA synthetase 1422 6.1.1.2 | Details
20 2EL7 1 A, B Tryptophanyl-tRNA synthetase 274 6.1.1.2 | Details
21 2A4M 1 A, B, C Tryptophanyl-tRNA synthetase II 1299 6.1.1.2 | Details
22 2G36 1 A Tryptophanyl-tRNA synthetase 2336 6.1.1.2 | Details
23 2YY5 1 A, B, C, D Tryptophanyl-tRNA synthetase 2104 6.1.1.2 | Details
24 3FI0 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R Tryptophanyl-tRNA synthetase 1422 6.1.1.2 | Details
25 3FHJ 1 A, B, C, D, E, F Tryptophanyl-tRNA synthetase 1422 6.1.1.2 | Details
26 1YID 1 A, B, C tryptophanyl-tRNA synthetase Enzyme 1299 6.1.1.2 | Details
27 1MB2 1 A, B, C, D, E, F TRYPTOPHAN-TRNA LIGASE 1422 6.1.1.2 | Details
28 3U1V 1 A, B, C, D De Novo design cysteine esterase FR29 32630
29 1MAW 1 A, B, C, D, E, F TRYPTOPHAN-TRNA LIGASE 1422 6.1.1.2 | Details
30 1D2R 1 A, B, C, D, E, F PROTEIN (TRYPTOPHANYL TRNA SYNTHETASE) 1422 6.1.1.2 | Details
31 1YIA 1 A, B, C tryptophanyl-tRNA synthetase Enzyme 1299 6.1.1.2 | Details