Sequence Similarity Clusters for the Entities in PDB 2YDG

Entity #1 | Chains: A
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 606 780 3
95 % 656 833 4 Flexibility: No
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 665 850 5
70 % 671 857 11
50 % 873 1084 8
40 % 876 1091 9
30 % 873 1085 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures