Sequence Similarity Clusters for the Entities in PDB 2Y6T

Entity #1 | Chains: A,B,C,D
CHYMOTRYPSINOGEN A protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 25 26 968
95 % 25 26 1334 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 25 26 1366
70 % 25 26 1400
50 % 25 26 1425
40 % 857 894 11
30 % 1843 1921 5
Entity #2 | Chains: E,F,G,H
ECOTIN protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26648
95 % 1 1 23008 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 1 22340
70 % 1 1 20490
50 % 17 19 2110
40 % 17 19 2149
30 % 17 19 2150

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures