Sequence Similarity Clusters for the Entities in PDB 2XUB

Entity #1 | Chains: A
DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC3 protein, length: 534 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29154
95 % 1 3 19496 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.6
PDBFlex
90 % 1 3 23582
70 % 1 3 21552
50 % 1 3 19057
40 % 1 3 17482
30 % 1 3 13889

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures