Sequence Similarity Clusters for the Entities in PDB 2XOM

Entity #1 | Chains: A
ARABINOGALACTAN ENDO-1,4-BETA-GALACTOSIDASE protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32117
95 % 1 2 25056 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 2 24262
70 % 1 2 23682
50 % 1 2 20801
40 % 1 2 17908
30 % 1 2 17053

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures