2X4U

Crystal structure of MHC CLass I HLA-A2.1 bound to HIV-1 Peptide RT468-476


Sequence Similarity Clusters for the Entities in PDB 2X4U

Entity #1 | Chains: A,D
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 90 231 54
95 % 128 292 65
90 % 146 356 40
70 % 367 860 6
50 % 368 874 7
40 % 398 935 8
30 % 399 960 13
Entity #2 | Chains: B,E
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 354 764 2
95 % 384 813 2
90 % 393 835 3
70 % 458 1142 4
50 % 464 1168 3
40 % 464 1168 4
30 % 464 1168 10
Entity #3 | Chains: C,F
REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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