Sequence Similarity Clusters for the Entities in PDB 2X04

Entity #1 | Chains: A,B
POLYADENYLATE-BINDING PROTEIN 1 protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 12 2678
95 % 3 12 2949 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 3 12 3004
70 % 3 12 2955
50 % 3 13 2806
40 % 4 15 2396
30 % 4 15 2242
Entity #2 | Chains: C,D
TRINUCLEOTIDE REPEAT-CONTAINING GENE 6C PROTEIN protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures