Sequence Similarity Clusters for the Entities in PDB 2WAD

Entity #1 | Chains: A,B,C
PENICILLIN-BINDING PROTEIN 2B protein, length: 680 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34261
95 % 1 2 22919 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.4
PDBFlex
90 % 1 3 17366
70 % 1 3 16219
50 % 1 3 14638
40 % 1 3 13618
30 % 1 5 7647

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures