Sequence Similarity Clusters for the Entities in PDB 2VWL

Entity #1 | Chains: A
ACTIVATED FACTOR XA HEAVY CHAIN protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 13 4765
95 % 25 136 311 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 25 136 324
70 % 25 137 365
50 % 25 137 435
40 % 92 290 186
30 % 913 1949 6
Entity #2 | Chains: L
FACTOR X LIGHT CHAIN protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 67 630
95 % 18 68 841 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 18 68 876
70 % 18 68 914
50 % 19 69 937
40 % 19 69 969
30 % 19 69 1017

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures