Sequence Similarity Clusters for the Entities in PDB 2VOA

Entity #1 | Chains: A,B
EXODEOXYRIBONUCLEASE III protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43748
95 % 1 1 39237 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 37458
70 % 1 1 33244
50 % 1 1 28939
40 % 1 5 12088
30 % 7 37 1266
Entity #2 | Chains: C
5'-D(*GP*CP*GP*GP*TP*AP*GP*CP*CP*GP)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
5'-D(*CP*GP*GP*CP*TP*AP*CP*CP*GP*CP)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures