Sequence Similarity Clusters for the Entities in PDB 2VNU

Entity #1 | Chains: B
5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP)-3' rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
EXOSOME COMPLEX EXONUCLEASE RRP44 protein, length: 760 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 88879
95 % 1 1 45006
90 % 1 1 51407
70 % 1 1 44934
50 % 1 1 38836
40 % 1 1 35088
30 % 1 3 12519

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2VNU 2 D EXOSOME COMPLEX EXONUCLEASE RRP44 RESIDUES 242-1001 4932 3.1.13 | Details 3.1.26 | Details
2 4PMW 1 A, B DIS3-like exonuclease 2 10090 3.1.13 | Details
3 4RO1 1 A, B DIS3-like exonuclease 2 4896 3.1.13 | Details