Sequence Similarity Clusters for the Entities in PDB 2VNU

Entity #1 | Chains: B
5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP)-3' rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
EXOSOME COMPLEX EXONUCLEASE RRP44 protein, length: 760 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 79917
95 % 1 1 51642
90 % 1 1 50964
70 % 1 1 44548
50 % 1 1 38513
40 % 1 1 34829
30 % 1 3 12389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures