Sequence Similarity Clusters for the Entities in PDB 2VL2

Entity #1 | Chains: A,B
PEROXIREDOXIN-5 protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 3486
95 % 7 13 1852 Flexibility: Low
Max RMSD: 8.7, Avg RMSD: 1.4
PDBFlex
90 % 7 13 1905
70 % 7 13 1949
50 % 11 18 1254
40 % 13 22 1069
30 % 14 27 889
Entity #2 | Chains: C
PEROXIREDOXIN-5 protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 3486
95 % 8 13 1852 Flexibility: Low
Max RMSD: 8.7, Avg RMSD: 1.4
PDBFlex
90 % 8 13 1905
70 % 8 13 1949
50 % 12 18 1254
40 % 14 22 1069
30 % 15 27 889

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures