2VAA

MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN


Sequence Similarity Clusters for the Entities in PDB 2VAA

Entity #1 | Chains: A
MHC CLASS I H-2KB HEAVY CHAIN protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 51 572
95 % 27 68 562
90 % 27 68 584
70 % 449 861 6
50 % 452 875 8
40 % 490 936 9
30 % 491 961 13
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 42 144 113
95 % 80 276 70
90 % 80 276 79
70 % 557 1143 4
50 % 567 1169 4
40 % 567 1169 5
30 % 567 1169 10
Entity #3 | Chains: P
VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures