Sequence Similarity Clusters for the Entities in PDB 2V86

Entity #1 | Chains: A,B
VDJ RECOMBINATION-ACTIVATING PROTEIN 2 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 4895
95 % 3 7 5725 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.4
PDBFlex
90 % 3 7 5764
70 % 3 7 5693
50 % 3 7 5472
40 % 3 7 5341
30 % 3 7 5097
Entity #2 | Chains: D,E
H3R2ME2AK4ME3 PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures