Sequence Similarity Clusters for the Entities in PDB 2QSS

Entity #1 | Chains: A,C
Hemoglobin subunit alpha protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 13 2206
95 % 3 13 2839 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 3 18 1806
70 % 51 341 22
50 % 114 737 7
40 % 114 737 8
30 % 127 785 11
Entity #2 | Chains: B,D
Hemoglobin subunit beta protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 13 2132
95 % 3 14 2551 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 3 18 1786
70 % 51 351 19
50 % 115 737 7
40 % 115 737 8
30 % 128 785 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures