Sequence Similarity Clusters for the Entities in PDB 2QPZ

Entity #1 | Chains: A
Naphthalene 1,2-dioxygenase system ferredoxin subunit protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59548
95 % 1 1 45407
90 % 1 1 42472
70 % 1 2 26704
50 % 1 2 23419
40 % 1 2 21404
30 % 3 8 6379

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3DQY 1 A Toluene 1,2-dioxygenase system ferredoxin subunit 303
2 1FQT 1 A, B RIESKE-TYPE FERREDOXIN OF BIPHENYL DIOXYGENASE 36873 1.14.12 | Details
3 2QPZ 1 A Naphthalene 1,2-dioxygenase system ferredoxin subunit 303
4 2YVJ 2 B Biphenyl dioxygenase ferredoxin subunit 306
5 2E4Q 1 A, C Biphenyl dioxygenase ferredoxin subunit 306
6 2E4P 1 A, B Biphenyl dioxygenase ferredoxin subunit 306
7 4EMJ 2 B Toluene 1,2-dioxygenase system ferredoxin subunit 303
8 5BOK 1 A Ferredoxin 1302548