Sequence Similarity Clusters for the Entities in PDB 2QL7

Entity #1 | Chains: A,C
Caspase-7 protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 2949
95 % 5 11 3594 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 11 3675
70 % 5 11 3655
50 % 5 11 3661
40 % 5 11 3588
30 % 5 11 3499
Entity #2 | Chains: B,D
Caspase-7 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 16 1694
95 % 10 23 1476 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 10 23 1483
70 % 3 9 4524
50 % 10 17 2616
40 % 10 17 2651
30 % 10 17 2636
Entity #3 | Chains: E,F
Inhibitor AC-IEPD_CHO protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: G
QGHGE protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures