Sequence Similarity Clusters for the Entities in PDB 2QFD

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
Probable ATP-dependent RNA helicase DDX58 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 3148
95 % 1 2 3925 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 5 7 2567
70 % 5 7 2615
50 % 5 7 2636
40 % 5 7 2657
30 % 5 7 2643

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures