Sequence Similarity Clusters for the Entities in PDB 2QBY

Entity #1 | Chains: C
DNA (33-MER) dna, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
DNA (33-MER) dna, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
Cell division control protein 6 homolog 1 protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75395
95 % 1 1 46035
90 % 1 1 43725
70 % 1 1 38523
50 % 1 2 24111
40 % 1 2 22021
30 % 1 3 16586
Entity #4 | Chains: B
Cell division control protein 6 homolog 3 protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75394
95 % 1 1 46034
90 % 1 1 43724
70 % 1 1 38522
50 % 1 1 33372
40 % 1 1 30227
30 % 2 3 16586

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures