Sequence Similarity Clusters for the Entities in PDB 2Q2E

Entity #1 | Chains: A
Type II DNA topoisomerase VI subunit A protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 84821
95 % 1 1 56968
90 % 1 1 42732
70 % 1 1 46805
50 % 1 1 40449
40 % 1 1 36547
30 % 2 2 12718
Entity #2 | Chains: B
Type 2 DNA topoisomerase 6 subunit B protein, length: 621 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 84820
95 % 1 1 56967
90 % 1 1 53705
70 % 1 1 46804
50 % 1 1 40448
40 % 1 1 36546
30 % 1 1 32217

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures