Sequence Similarity Clusters for the Entities in PDB 2PT7

Entity #1 | Chains: A,B,C,D,E,F
Cag-alfa protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 3045
95 % 1 6 3752 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.5
PDBFlex
90 % 1 6 3818
70 % 1 6 3811
50 % 1 6 3736
40 % 1 6 3727
30 % 1 6 3642
Entity #2 | Chains: G,H
Hypothetical protein protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51571
95 % 1 1 39280 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 37467
70 % 1 1 33324
50 % 1 1 29004
40 % 1 1 26257
30 % 1 1 23305

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures