Sequence Similarity Clusters for the Entities in PDB 2PR4

Entity #1 | Chains: L
nmAb 2F5 Fab' Heavy Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 33 1483
95 % 14 41 1545 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 14 41 1577
70 % 796 2262 2
50 % 1015 2875 2
40 % 1015 2875 2
30 % 2067 5831 1
Entity #2 | Chains: H
nmAb 2F5 Fab' light Chain protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 11629
95 % 14 41 1550 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 0.8
PDBFlex
90 % 14 41 1585
70 % 981 2773 1
50 % 1040 2914 1
40 % 1040 2914 1
30 % 2068 5831 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures