Sequence Similarity Clusters for the Entities in PDB 2PQK

Entity #1 | Chains: A
Induced myeloid leukemia cell differentiation protein Mcl-1 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 29 449
95 % 17 46 298 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.1
PDBFlex
90 % 22 66 271
70 % 22 66 312
50 % 22 66 368
40 % 22 66 390
30 % 39 99 239
Entity #2 | Chains: B
Bim BH3 peptide protein, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57222
95 % 1 1 42632
90 % 1 1 40573
70 % 14 23 2156
50 % 14 23 2185
40 % 14 23 2223
30 % 14 23 2221

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures