Sequence Similarity Clusters for the Entities in PDB 2PMU

Entity #1 | Chains: A,B,C,D,E,F
response regulator PHOP protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16927
95 % 1 1 15558 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 1 1 15301
70 % 1 1 14387
50 % 1 1 13042
40 % 1 1 12167
30 % 1 1 11166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures