Sequence Similarity Clusters for the Entities in PDB 2PI0

Entity #1 | Chains: E
PRDIII-I region of human interferon-B promoter strand 1 dna, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: F
PRDIII-I region of human interferon-B promoter strand 2 dna, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,B,C,D
Interferon regulatory factor 3 protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 7775
95 % 1 4 5910 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.9
PDBFlex
90 % 1 4 6039
70 % 1 4 6153
50 % 1 4 5915
40 % 1 4 5493
30 % 1 4 5483

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures